Accepted Posters
| apbc001 | Computational Identification of Regulatory Elements in Silico | Vinay Kumar Singh, Sree Krishna ch. and Soma Marla |
| apbc002 | Studying the Genetic Diversity in Tetraploid Cotton Cultivars (Gossypium Hirsutum) by using Cytogenetic and RAPD Characteristics | Masoud Sheidai, Zahra Hawali Shahriari |
| apbc003 | Effectivity of Internal Validation Techniques for Gene Clustering | Chunmei Yang, Baikun Wan, Xiaofeng Gao |
| apbc004 | Distinct Alleles of MBL and SP-A in Patients of Chronic Cavitary Pulmonary Aspergillosis and Allergic Bronchopulmonary Aspergillosis | Mudit Vaid, Savneet Kaur, Helen Sambatakou, Taruna Madan, David W Denning, P. Usha Sarma. |
| apbc005 | Bioengineering: A DNA Encoding Technology with Bioinformatics Analysis to Application of Linear Mechanics Systems | Quan-Fang Wang |
| apbc006 | Side-Chain and Backbone Ordering in Homopolymers | Yanjie Wei, Walter Nadler, Ulrich H. E. Hansmann |
| apbc007 | Discovering Progressive High-Order Patterns in Biosequences | David K.Y. Chiu and Thomas W.H. Lui |
| apbc008 | Surface Accessibility of Post-Translational Modifications and Protein-Protein Interactivity | CNI Pang, A Hayen, MR Wilkins |
| apbc009 | Structural and Functional Characteristics of the Promoter Regions of the Genes on Human Chromosome 22 | Guang Bin Liu |
| apbc010 | BayesMD: Flexible Biological Modelling for Motif Discovery | Ole Winther, Man-Hung Eric Tang, Anders Krogh |
| apbc011 | Cytochrome P450 Structures – A Phylogenetic Analysis | Gowri Shankar B.A, Michael Charleston, Michael Murray and David Hibbs |
| apbc012 | Characterization and Prediction of the Antioxidant Response Elements | AY Chou, PJ Sudmant, WW Wasserman |
| apbc013 | DP-Bind: Sequence-Based Application of Multiple Machine Learning Methods to Predict DNA-Binding Sites in DNA-Binding Proteins | IB Kuznetsov, Z Gou, S Hwang |
| apbc014 | Prediction of Human Mitochondrial Proteins using SVM and Neural Network | Zhong Huang |
| apbc015 | Phenotypic-Specific Gene Module Discovery using a Diagnostic Tree and caBIG(tm) VISDA | Yitan Zhu, Zuyi Wang, Yuanjian Feng, Jianhua Xuan, David J. Miller, Eric P. Hoffman, and Yue Wang |
| apbc016 | Confirmation of the Existence of CRISPRs in Microbial Genomes by BLAST | MCJ Ma, SK Ng, H Xue |
| apbc017 | Multi-Class Combination of Microarray Data: From Data Preprocessing to Functional Aspects | YY Leung, CQ Chang, YS Hung |
| apbc018 | Dynamical and Structural Studies of Amyloid Formation: A Discrete Molecular Dynamics Simulation Perspective | Chiu Fan Lee and James Loken |
| apbc019 | Inferring Gene Regulatory Networks from Time-Series Gene Expression Data using Recurrent Neural Networks and Swarm Intelligence | Yuji Zhang |
| apbc020 | Sat DNA Analyzer, the First Computing Solution for Satellite-DNA Evolutionary Analysis | R Navajas-Pérez, M Ruiz Rejón , MA Garrido Ramos, JL Aznarte, C Rubio Escudero |
| apbc021 | Differential Evolutionary Conservation of Motif Modes in the Yeast Protein Interaction Network | Wei-Po Lee, Tun-Wen Pai and Wen-Shyong Tzou |
| apbc022 | Motifcombinator: A Web Tool to Search for Combinations of Cis-Regulatory Motifs | M Kato, T Tsunoda |
| apbc023 | Nonparametric Tests of Association uf Multiple Genes with Qualitative and Quantitative Phenotypes based on Data-Adaptive U-Statistics | Zhi Wei, Mingyao Li, Hongzhe Li |
| apbc024 | Dependence Among Sites in RNA Evolution | Jiaye Yu, Jeffrey L. Thorne |
| apbc025 | Prediction of Protein Secondary Structure based on Residue Pair Types and Conformational States using Dynamic Programming Algorithm | Sahar Partoa, Mehdi Sadeghib , Bijan Ranjbara, Shahriar Arab |
| apbc026 | Novel Tag SNP Selection Strategy that Incorporates Functional Information and Genotyping Assay Failure Rates | J.S.H. Kwan, P.C. Sham |
| apbc027 | Genome-Scale Prediction of Protein Subcellular Location in Gram-Positive Bacteria | M Zhou, J Boekhorst, C Francke, RJ Siezen |
| apbc028 | Combining Structure Mining and Text Mining for Functional Annotation of Proteins | K Au-Yeung, D Rebholz-Schuhmann, K Henrick, TJ Oldfield |
| apbc029 | What You Should Know About R2 When Selecting Tagsnp by Linkage Disequilibrium? The Sampling Error of R2 and the Use of Confident Interval for tagSNP Selection | Nelson LS Tang |
| apbc030 | Mapping of Genetic Modifer of Congenital Heart Defects in Type IIa Procollagen Deficient Mice | PLF Tang, KSE Cheah, YQ Song |
| apbc031 | MIBDQC, A Knowledge Base Implemented using the Entity-Attribute-Value Model for Quality Control of Botanical Drug Products | Charlie Chang Liu, Kei Cheung, Tommy Yungchi Cheng, Allan Sik-Yin Lau, Paul Kwong-Hang Tam |
| apbc032 | iCartiGD: The Integrated Cartilage Gene Database | Ming Yiu Yeung, David K. Smith, Matthew S.Y. Chan, Brian C. Wong, Kenneth M.C. Cheung, Kathryn S.E. Cheah, Pak Sham, Danny Chan, You-Qiang Song |
| apbc033 | A Fuzzy Neural Network Algorithm for Pharmacogenomics Studies | Eugene Lin, Yuchi Hwang |
| apbc034 | A Predictive Model for Macrophage-Specific Genomic Regulatory Regions | Ying Sheng, Boris Lenhard |
| apbc035 | SplitsTree4- A Program for Computing and Exploring Phylogenetic Networks & Trees | Daniel H. Huson |
| apbc036 | Genome Halving with an Outgroup | Chunfang Zheng, Qian Zhu |
| apbc037 | Relative Roles of PAK4 Kinase Activity and PAK4-Integrin Binding for Promotion of Cell Motility | Zhilun Li, Hongquan Zhang, John Lock, Steffen Teller, Yajuan Liu and Staffan Strömblad |
| apbc038 | Global Topological Properties of the Integral Membrane Protein Interactome in Yeast | Kelvin Xi Zhang and B. F. Francis Ouellette |
| apbc039 | Predicting Protein-Protein Interactions using Fuzzy Inference Approach | Xuejian Xiong, Kevin Breitkreuz, Mike Tyers |
| apbc040 | Large-Scale Comparative Genomic Analyses of Cytoplasmic Membrane Transport Systems in Prokaryotes | Qinghu Ren, Kaixi Chen and Ian T. Paulsen |
| apbc041 | Understanding Temporal Regulation of Inorganic Phosphate Signaling, Transcriptome, and Proteome in Osteoblast in a Time-Course Study | M Yi, CE Camalier, DA Lucas, LR Yu, TD Veenstra, TP Conrads, GRBeck,and RM Stephens |
| apbc042 | Enrichment Analysis Method Seeking the “Common” and “Unique” Pathways as the Underlying Biological Themes using Multiple High-Throughput Datasets | M Yi, and RM Stephens |
| apbc043 | A Projection and Search Algorithm for the Bicluster Problem | Feng Liu, Xiaowen Liu, Hui Fan, Qingsong Xie |
| apbc044 | Gene-Gene Interactions for Asthma and Plasma Total IgE Concentration in Chinese Children by using Multifactor-Dimensionality Reduction (Mdr) Method | IHS Chan, TF Leung, NLS Tang, CY Li, YM Sung, GWK Wong, CK Wong and CWK Lam |
| apbc045 | Osmotic Stress Response Gene Mining System in Plant Genomes | Yong Li, Yanming Zhu, and Dianjing Guo |
| apbc046 | Genome Strategy for Recognition Sites of Restriction Enzymes | Ken Yamakura, Yoko Shinbo, Md.Altaf-Ul-Amin, Ken Kurokawa, Shigehiko Kanaya |
| apbc047 | Experimental Design for Time-Series Microarray Analysis | Hiroki Takahashi, Ryosuke Ito, Taku Oshima, Naotake Ogasawara, Md. Altaf-Ul-Amin, Shigehiko Kanaya and Ken Kurokawa |
| apbc048 | Integrated Analyses of Genechip Data in Arabidopsis Thaliana | Masayoshi Wada, Munehide Itoyama, Md. Altaf-Ul-Amin, Yukio Nakagawa, Ken Kurokawa, Shigehiko Kanaya |
| apbc049 | Species-Metabolite Database (KNAoSAcK): Elucidating Diversity of Flavonoids | Shun-ichi Sakaguchi, Yoko Shinbo, Yukiko Nakamura, Md. Altaf-Ul-Amin, Ken Kurokawa, Toshiaki, Tokimatsu, Masahiro Arita, Kimito Funatsu, Shigehiko Kanaya |
| apbc050 | Detection of Transcription Units based on Integration of Non-Targeted Analyses | Hirokazu Kobayashi, Joe Akitomi, Nobuyuki Fujii, Md Altaf-Ul-Amin, Ken Kurokawa, Kazuo Kobayashi, Naotaka Ogasawara, Shigehiko Kanaya |
| apbc051 | Developing Algorithm for Visualizing Orthologous Gene Clusters having Common Domains | Misako Arai, Yoko Shinbo, Md. Altaf-Ul-Amin, Shigehiko Kanaya, Ken Kurokawa |
| apbc052 | Identification of Molecular Chaperones and Glycolytic Enzymes Involved in Enhanced Production of Recombinant Antibody: Proteomic Studies | K Lee, HT Lee, H Im, DH Kim, DJ Oh |
| apbc053 | Applications of Domain-Domain Interaction in Pathways Study | Hsueh-Chuan Liu, Chien-Hung Huang, J.F Tsai, Ka-Lok Ng |
| apbc054 | Predicting Putative Human Mirna Precursor Candidates Associated with Promoter Regions and Cpg Islands | Ming-Cheng Tsai, Ka-Lok Ng |
| apbc055 | Protein Hierarchical Selection: An Information Portal for Multiple Protein Structural Alignment | Tun-Wen Pai, Jian-Ming Chen, Bo-Han Su, Margaret Dah-Tsyr Chang, Hao-Teng Chang, Wei-I Chou |
| apbc056 | Linkage Analysis on Familial Early-Onset Degenerative Disc Disease (DDD) | Daniel W.H. Ho, Kenneth M.C. Cheung, Danny Chan, Jaro Karppinen, SP Yip, Jurg Ott, Keith D.K. Luk, John C.Y. Leong, Kathryn S.E. Cheah, Pak Sham and You-Qiang Song |
| apbc057 | Discrimination of Beta-Barrel Membrane Proteins using Machine Learning Techniques | M. Michael Gromiha and Makiko Suwa |
| apbc058 | Mathematical Modeling of Molecular Genetic Processes Involved in Regulation of E. Coli Respiration | AV Ratushny, TM Khlebodarova , VA Likhoshvai |
| apbc059 | Identification of Regulatory Gene Module Composite by Lalent Variable Modeling and nICA | Ting Gong, Yitan Zhu, Jianhua Xuan, Huai Li, Chen Wang, Robert Clarke, Eric P. Hoffman, Yue Wang |
| apbc060 | Modelling the Distribution of Gene Expressions using Stable Distributions | Salas-Gonzalez D, Kuruoglu E, Ruiz DP |
| apbc061 | Computational Prediction of Cis-Regulatory Modules in Human Genome |
KL Mok, FYL Chin, DK Smith, PC Sham, KSE Cheah |
| apbc062 | Harmonization of Val-tRNA Synthetase Tree with Non-Tree Evidence for an Archael Root of Life | J Chen, FWK Mat, H Xue and JTF Wong |
| apbc063 | Low-Resolution Structural Genomics by Structure Prediction and Filtering of Decoys using Sparse Experimental Data | JM Bujnicki, MJ Gajda, J Kosinski, A Obarska, M Feder, AA Chmiel, S Pawlak, IA Cymerman, KJ Skowronek |
| apbc064 | Characterization of Developmental Genes Through Genomic Annotation of 5,534 Non-Redundant ESTs Isolated from Early Gestation Human Eyes | CP Pang, KW Choy, CC Wang, A Ogura, DSC Lam, K Ikeo, T Gojobori |
| apbc065 | Complement Factor H Polymorphisms in Chinese Population with Age-Related Macular Degeneration | POS Tam, LJ Chen, CP Pang |
| apbc066 | Mapping the Myopia Genes | CY Lam and CP Pang |
| apbc067 | Association Between High Myopia and Polymorphisms in PAX6 Promoter and Coding Regions | KP Chan, CY Lam, POS Tam, SWYChiang, CP Pang |
| apbc068 | SNPs and Interaction Analysis of the RHO and RP1 Genes in Retinitis Pigmentosa Patients | SWY Chiang, CP Pang, DYWang, KKLChong, WM Chan, POSTam, DSC Lam |
| apbc069 | Identification and Characterization of Novel Transcription Factor Binding Motif in the Promoter of Human Ribonuclease | Hsiu-Yiu Wang, Tun-Wen Pai, Hao-Teng Chang, Yuan-Hon Lee, Yen-Shin Chang, Tan-chi Fan, Shu-Chuan Lin, Margaret Dah-Tsyr Chang |
| apbc070 | Computational Drug Repositioning and Side Effect Prediction for Kinase Inhibitors | YY Li, J An, SJM Jones |
| apbc071 | Local Optima Resistant Gibbs Sampling Methods for Motif Discovery Realized by an Improved Annealing | K Shida |
| apbc072 | A Novel Approach for Anterior Chamber Angle Analysis – Anterior Chamber Angle Detection with Edge Measurement and Identification Algorithm (ACADEMIA) | CYL Cheung, CKS Leung, CKF Yiu, CP Pang, DSC Lam |
| apbc073 | Over-Representation Pattern of SNPs in the Genome of Restless Legs Syndrome Samples | MX Li, LJiang, YQSong, SL Ho, P Sham |
| apbc074 | Molecular Phylogeny of the Genus Ceropegia | S Surveswaran, M Sun, H Corke |
| apbc075 | Sequence Analysis of Nucleocalpsid Gene of Indian Isolate of Avian Infectious Bronchitis Virus | M. Kaul, M. Kadam, |
| apbc076 | Development and Improvement of a Prototype System for the Inference of Genetic Networks based on Genetic Programming | Kouji Tanaka, Yutaka Akiyama, Hayato Yamana |
| apbc077 | A Genetic Algorithm for Consensus RNA Secondary Structure Prediction based on Base-Pairing Probability Matrices | A Taneda |
| apbc078 | Characterisation of Two Evolutionary and Functional Distinct Subpopulations of Genes with Promoter CpG Island | SM Tang, YZ Zhao, RJ Epstein |
| apbc079 | The Association of SNP of Apolipoprotein Exon-4 with primary Open Angle Glaucoma | CSL Lau, YJ Hu |
| apbc080 | Prevalence and Distribution of WDR36 Variants in Primary Open Angle Glaucoma Patients | HF Yam, DY Wang, BJ Fan, KW Charles, DYL Leung, CY Cheng, POS Tam, DSC Lam, CP Pang |
| apbc081 | Genomic Investigation of Primary Open Angle Glaucoma | TK Ng, CP Pang |
| apbc082 | Fifteen Candidate Genes Analysis in a Chinese Family with Congenital Posterior Polar Cataract | KSA Lee, LY Zhang, POS Tam, DSP Fan, DSC Lam, CP Pang |
| apbc083 | Two Novel Missense Mutations of Crystalline Genes Caused Autosomal Dominant Congenital Cataract | LY Zhang, POS Tam, DSP Fan, CKS Leung, DSC Lam, CP Pang |
| apbc084 | Genome-Wide Study Reveals the Signaling Pathways Modulated by Gold-1a Treatment in Hepatocellular Carcinoma | Gloria Hoi-Yee Li, Ching Tung Lum, Raymond Wai-Yin Sun, Samuel Sai-Ming Ng, David K. Smith, Siu Ming Yiu, Chi-Ming Che, Marie C.M. Lin |
| apbc085 | Comparative Analysis of Alternative Splicing Events in the Human, Mouse and Rat | C.J. Chen, Fang Rong Hsu, Wei-Chung Shia |
| apbc088 | Distribution of Highly Conserved Non-Coding Elements (HCNEs) in Danio Rerio | Xianjun Dong, Altuna Akalin, Boris Lenhard |
| apbc089 | A Guided Sampling Algorithm for Identifying Network Motifs in a Transcription Regulatory Network | Raymond Wan, Nelson Hayes, Susumu Goto and Hiroshi Mamitsuka |
| apbc091 | Experiments on Fitting Protein Chains To Lattices | Dallas Thomas, Ján Maňuch, Daya Gaur |
| apbc092 | Using Position Specific Scoring Matrices to Improve the Prediction Performance of Protein Subnuclear Localization | Guan-Hau Chen, Su-An Chen, and Yu-Yen Ou |
| apbc093 | TodGRID: Development of a Database Grid Targeting for Translational Genomics and Proteomics Research | John Phan, Todd Stokes, May D. Wang |
| apbc094 | Baseline Removal and Peak Identification in the Mass Spectrometry based Proteomics Research | Tao Ma, Chang-feng Quo, May D. Wang |
| apbc095 | Analysis of Alternative Splicing in Plant Genomes based on Clustering of Full-Length cDNAs | SK Chang, YT Chao, RS Liu, SY Chen |
| apbc096 | Reduction of Noise in Microarray Gene Expression Data Originated from the Microarray Scanner | Jungeun Yang, Hye Young Kim, Jin Hyuk Kim, Yong Sung Lee |
| apbc097 | Suggestion of Method for Inference of Genetic Network using cDNA Microarray Gene Expression Data | Hye Young Kim, Jin Il Han, Yong Sung Lee, Jin Hyuk Kim |
| apbc098 | Investigation of Information Flow Through Genetic Network from Large Gene Expression Data | Min Jung Kim, Bo Kyung Kim, Yong Sung Lee, Jin Hyuk Kim |
| apbc099 | In Silico Reconstruction and Comparison of Flavour-Forming Pathways in Lactic Acid Bacteria | MJ Liu, RJ Siezen |
| apbc100 | Molecular Clocks in Virus Evolution: Is Synonymous Clock Homogenous in a Genome? | Tsan-Yuk Lam, Chung-Chau Hon, Zhenggang Wang, Frederick C.C. Leung |
| apbc101 | Investigating Epistasis in Degenerative Disc Disease | P.Y.P. Kao, D. Chan, K.M.C. Cheung, K.S.E. Cheah, P.C. Sham, Y.Q. Song |
| apbc102 | Gene and Protein Expression Profiles of the Intervertebral Disc: In Health and Disease | Anita F.Y. Yee, Mauro Alini, Ian Melhado, Kathryn S.E. Cheah, Kenneth M.C. Cheung and Danny Chan |
| apbc103 | Evolutionary Insights into the Ecology of Coronaviruses | D Vijaykrishna, GJD Smith, JX Zhang, JSM Peiris, H Chen , Y Guan |
| apbc104 | The Anti-Angiogenic Signaling Network of rAAV-HGFK1 | Wing Sze Leung, Zan Shen, Siu Ming Yiu, Hsiang Fu Kung, Marie C.M. Lin |
| apbc105 | Genomic Analysis of Early Response Induced by Hepatitis B Virus Infection in Human Hepatoma HepAD38 Cells | William Ka-Chun Cheung, Ming-Liang He, Hsiang-Fu Kung and Marie C.M. Lin |
| apbc106 | Genetic Characterization and Diversity of Iranian Olive Cultivars by using Microsatellite Markers | Zahra Normohammadi, Angjelina Belaj, Isabel Trujillo, Luic Rallo Romero, Majid Sadeghizadeh, Mehdi Hosseini-Mazinani |
| apbc107 | Specificity Prediction of PDZ Domain using Kernel based Machine Learning | Jinho Kim, Jaeseong Yang, Jongkyung Kim, Seungjin Choi, Sanguk Kim |
| apbc108 | Assessing Limitations of Gene Regulatory Network Inference Methods | JWK Ho, MA Charleston |
| apbc109 | The Challenges and Strategies for Computational Mass Spectrometry | Ruixiang Sun |
| apbc110 | Study of S and Z Allele Frequencies of Alpha1-Antitrypsin in Healthy Subjects in Iranian Population | Bahman GH Goudarzi, Abbas S. Lotfi, Abbas Zare M., Seyed A. Mesbah-Namin, and Roya Bagherian |
| apbc111 | Bioinformatics Analysis and Identification of non-Synonymous SNPs in Candidate Genes for Ascites | Limei Han and M.A.M. Groenen |
| apbc112 | PyCOGENT: A Comprehensive Toolkit For Comparative Genomic Data Analysis | P Maxwell, R Knight, J Widmann, M Wakefield, S Smit, B Easton, Z Liu, R Sammut, C Lozupone, M Hamady, S Wilson, JG Caporaso, A Birmingham, and GA Huttley |
